Long time network and security geek here.. And I almost went to that conference

I suspect they don't mean jamming in the RF sense--broadcasting a signal to interfere directly with the wifi band. Wifi signals are in the 2.4 GHz and 5.8 GHz range, far away from anything aviation cares about, so RF jamming still shouldn't affect flight safety.
The reason we caution people against using public wifi is it's pretty easy to create a wifi network that appears to be legitimate. If the plane's wifi network is called 'Delta WiFi', a bad guy or conference geek, would create another network called 'Delta WiFi'. Some newly-connected devices would simply choose the attacker's network. It looks a phone or tablet like the bad network is just another Delta wifi access point, similar to what you'd see in a campus environment: multiple access points broadcasting the same network. Once connected to the fake 'Delta WiFi', the attacker passes the traffic through their device then along to the legitimate 'Delta WiFi', giving the attacker a view of the client's traffic.
But most devices are already connected to the legitimate 'Delta WiFi' network, especially if that one came online and started broadcasting first. The bad guy can see which clients are connected to the legitimate network. That's all transmitted in the clear, even on wifi networks running encryption. The attacker can make a list of those clients and spoof a 'deauthentication frame'. That's a standard message from an access point to a client telling them that the access point is closing the connection. That happens when, for instance, a wifi access point is restarted--it tells the client to find another access point. That deauth frame is not encrypted, even on encrypted wifi. So the attacker spoofs the deauth frame from the legitimate Delta network to the client, the client still wants to find a 'Delta WiFi' access point, and it finds the only other 'Delta WiFi' available, which is the attacker's.
I suspect that's exactly what happened, and the media is confusing the 'deauth frame' with 'jamming'. If the attacker's fake access point was misconfigured, clients would have experienced connection problems after switching over, and that may have prompted the flight crew to restart the wifi system and given credence to the 'jamming' reports.